Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Mmp8O70138 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.64■□□□□ 0.57
Mmp8O70138 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.64■□□□□ 0.57
Mmp8O70138 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Mmp8O70138 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.64■□□□□ 0.57
Mmp8O70138 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.64■□□□□ 0.57
Mmp8O70138 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.64■□□□□ 0.57
Mmp8O70138 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Mmp8O70138 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.64■□□□□ 0.57
Mmp8O70138 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp8O70138 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.64■□□□□ 0.57
Mmp8O70138 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.63■□□□□ 0.57
Mmp8O70138 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Mmp8O70138 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Mmp8O70138 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Mmp8O70138 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Mmp8O70138 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.63■□□□□ 0.57
Mmp8O70138 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.63■□□□□ 0.57
Mmp8O70138 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Mmp8O70138 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp8O70138 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mmp8O70138 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mmp8O70138 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Mmp8O70138 Gm27525-201ENSMUST00000184465 107 ntBASIC18.62■□□□□ 0.57
Mmp8O70138 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.62■□□□□ 0.57
Mmp8O70138 Gm18206-201ENSMUST00000207027 926 ntBASIC18.62■□□□□ 0.57
Mmp8O70138 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mmp8O70138 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.62■□□□□ 0.57
Mmp8O70138 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.62■□□□□ 0.57
Mmp8O70138 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Mmp8O70138 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp8O70138 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Mmp8O70138 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Mmp8O70138 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Mmp8O70138 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.61■□□□□ 0.57
Mmp8O70138 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Mmp8O70138 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.61■□□□□ 0.57
Mmp8O70138 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.61■□□□□ 0.57
Mmp8O70138 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.61■□□□□ 0.57
Mmp8O70138 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.61■□□□□ 0.57
Mmp8O70138 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms