Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
BckdkO55028 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.21□□□□□ -0.13
BckdkO55028 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.21□□□□□ -0.13
BckdkO55028 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
BckdkO55028 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.21□□□□□ -0.13
BckdkO55028 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
BckdkO55028 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.21□□□□□ -0.13
BckdkO55028 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BckdkO55028 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.21□□□□□ -0.13
BckdkO55028 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
BckdkO55028 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
BckdkO55028 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
BckdkO55028 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
BckdkO55028 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
BckdkO55028 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
BckdkO55028 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
BckdkO55028 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
BckdkO55028 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
BckdkO55028 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
BckdkO55028 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BckdkO55028 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.2□□□□□ -0.14
BckdkO55028 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
BckdkO55028 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.2□□□□□ -0.14
BckdkO55028 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.2□□□□□ -0.14
BckdkO55028 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
BckdkO55028 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.2□□□□□ -0.14
BckdkO55028 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
BckdkO55028 Gm6089-201ENSMUST00000197666 938 ntBASIC14.2□□□□□ -0.14
BckdkO55028 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.2□□□□□ -0.14
BckdkO55028 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.2□□□□□ -0.14
BckdkO55028 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
BckdkO55028 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BckdkO55028 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
BckdkO55028 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.2□□□□□ -0.14
BckdkO55028 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BckdkO55028 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
BckdkO55028 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.2□□□□□ -0.14
BckdkO55028 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
BckdkO55028 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.19□□□□□ -0.14
BckdkO55028 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
BckdkO55028 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.19□□□□□ -0.14
BckdkO55028 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.19□□□□□ -0.14
BckdkO55028 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
BckdkO55028 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.19□□□□□ -0.14
BckdkO55028 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.19□□□□□ -0.14
BckdkO55028 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 AV026068-213ENSMUST00000223675 1171 ntBASIC14.19□□□□□ -0.14
BckdkO55028 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.19□□□□□ -0.14
BckdkO55028 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms