Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm13223-201ENSMUST00000118609 747 ntBASIC16.85■□□□□ 0.29
Prom1O54990 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.85■□□□□ 0.29
Prom1O54990 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.85■□□□□ 0.29
Prom1O54990 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.85■□□□□ 0.29
Prom1O54990 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.85■□□□□ 0.29
Prom1O54990 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Prom1O54990 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.85■□□□□ 0.29
Prom1O54990 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Prom1O54990 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Prom1O54990 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.84■□□□□ 0.29
Prom1O54990 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.84■□□□□ 0.29
Prom1O54990 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.84■□□□□ 0.29
Prom1O54990 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.84■□□□□ 0.29
Prom1O54990 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Prom1O54990 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.84■□□□□ 0.29
Prom1O54990 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Prom1O54990 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Prom1O54990 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prom1O54990 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Prom1O54990 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prom1O54990 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Prom1O54990 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Prom1O54990 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prom1O54990 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prom1O54990 Gm12151-201ENSMUST00000121374 290 ntBASIC16.83■□□□□ 0.28
Prom1O54990 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prom1O54990 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.83■□□□□ 0.28
Prom1O54990 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prom1O54990 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.83■□□□□ 0.28
Prom1O54990 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.83■□□□□ 0.28
Prom1O54990 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prom1O54990 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.83■□□□□ 0.28
Prom1O54990 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prom1O54990 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prom1O54990 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prom1O54990 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prom1O54990 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.83■□□□□ 0.28
Prom1O54990 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prom1O54990 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prom1O54990 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.83■□□□□ 0.28
Prom1O54990 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Prom1O54990 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Prom1O54990 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Prom1O54990 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Prom1O54990 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.82■□□□□ 0.28
Prom1O54990 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Prom1O54990 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.82■□□□□ 0.28
Prom1O54990 Gm27618-201ENSMUST00000183671 60 ntBASIC16.82■□□□□ 0.28
Prom1O54990 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.82■□□□□ 0.28
Prom1O54990 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.82■□□□□ 0.28
Prom1O54990 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.82■□□□□ 0.28
Prom1O54990 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Prom1O54990 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Prom1O54990 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prom1O54990 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms