Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.91□□□□□ -0.18
Rnf13O54965 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.9□□□□□ -0.18
Rnf13O54965 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Rnf13O54965 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.9□□□□□ -0.18
Rnf13O54965 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rnf13O54965 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rnf13O54965 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.9□□□□□ -0.18
Rnf13O54965 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rnf13O54965 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rnf13O54965 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rnf13O54965 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Rnf13O54965 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf13O54965 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rnf13O54965 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rnf13O54965 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rnf13O54965 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.89□□□□□ -0.19
Rnf13O54965 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rnf13O54965 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Gm25406-201ENSMUST00000157599 105 ntBASIC13.89□□□□□ -0.19
Rnf13O54965 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.89□□□□□ -0.19
Rnf13O54965 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Gm5587-201ENSMUST00000206270 674 ntBASIC13.89□□□□□ -0.19
Rnf13O54965 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Rnf13O54965 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rnf13O54965 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf13O54965 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.88□□□□□ -0.19
Rnf13O54965 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.88□□□□□ -0.19
Rnf13O54965 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rnf13O54965 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.88□□□□□ -0.19
Rnf13O54965 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.88□□□□□ -0.19
Rnf13O54965 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rnf13O54965 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rnf13O54965 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf13O54965 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Rnf13O54965 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf13O54965 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Rnf13O54965 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Rnf13O54965 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Rnf13O54965 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms