Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.67□□□□□ -0.22
Dkk1O54908 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.67□□□□□ -0.22
Dkk1O54908 Gm8582-201ENSMUST00000164061 789 ntBASIC13.67□□□□□ -0.22
Dkk1O54908 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Dkk1O54908 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Dkk1O54908 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC13.67□□□□□ -0.22
Dkk1O54908 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.67□□□□□ -0.22
Dkk1O54908 Gm38047-201ENSMUST00000193690 1133 ntBASIC13.67□□□□□ -0.22
Dkk1O54908 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC13.67□□□□□ -0.22
Dkk1O54908 Gm44332-201ENSMUST00000203712 433 ntBASIC13.67□□□□□ -0.22
Dkk1O54908 Gm4803-201ENSMUST00000218729 1279 ntBASIC13.67□□□□□ -0.22
Dkk1O54908 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Dkk1O54908 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Dkk1O54908 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Dkk1O54908 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.67□□□□□ -0.22
Dkk1O54908 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Dkk1O54908 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Dkk1O54908 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dkk1O54908 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.66□□□□□ -0.22
Dkk1O54908 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Dkk1O54908 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Dkk1O54908 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Gm14854-201ENSMUST00000117758 841 ntBASIC13.66□□□□□ -0.22
Dkk1O54908 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.66□□□□□ -0.22
Dkk1O54908 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC13.66□□□□□ -0.22
Dkk1O54908 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Gm34391-201ENSMUST00000203706 907 ntBASIC13.66□□□□□ -0.22
Dkk1O54908 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.66□□□□□ -0.22
Dkk1O54908 AC154627.1-201ENSMUST00000228799 1286 ntBASIC13.66□□□□□ -0.22
Dkk1O54908 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Dkk1O54908 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Dkk1O54908 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.66□□□□□ -0.22
Dkk1O54908 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.66□□□□□ -0.22
Dkk1O54908 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dkk1O54908 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Dkk1O54908 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Dkk1O54908 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Dkk1O54908 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Dkk1O54908 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Dkk1O54908 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Dkk1O54908 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.65□□□□□ -0.22
Dkk1O54908 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Dkk1O54908 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Mup-ps10-201ENSMUST00000119626 556 ntBASIC13.65□□□□□ -0.22
Dkk1O54908 Gm13487-201ENSMUST00000122240 864 ntBASIC13.65□□□□□ -0.22
Dkk1O54908 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.65□□□□□ -0.22
Dkk1O54908 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Gm17971-201ENSMUST00000190239 806 ntBASIC13.65□□□□□ -0.22
Dkk1O54908 Gm45078-201ENSMUST00000205343 546 ntBASIC13.65□□□□□ -0.22
Dkk1O54908 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC13.65□□□□□ -0.22
Dkk1O54908 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Gm9172-201ENSMUST00000212092 954 ntBASIC13.65□□□□□ -0.22
Dkk1O54908 AC156952.1-201ENSMUST00000220361 793 ntBASIC13.65□□□□□ -0.22
Dkk1O54908 Gm3333-202ENSMUST00000221763 1044 ntBASIC13.65□□□□□ -0.22
Dkk1O54908 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dkk1O54908 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms