Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DffbO54788 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
DffbO54788 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.18□□□□□ -0.3
DffbO54788 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Gm5587-201ENSMUST00000206270 674 ntBASIC13.18□□□□□ -0.3
DffbO54788 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
DffbO54788 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DffbO54788 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DffbO54788 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.18□□□□□ -0.3
DffbO54788 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DffbO54788 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DffbO54788 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.17□□□□□ -0.3
DffbO54788 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
DffbO54788 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DffbO54788 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
DffbO54788 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.17□□□□□ -0.3
DffbO54788 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.17□□□□□ -0.3
DffbO54788 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
DffbO54788 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.17□□□□□ -0.3
DffbO54788 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
DffbO54788 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DffbO54788 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.16□□□□□ -0.3
DffbO54788 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
DffbO54788 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.16□□□□□ -0.3
DffbO54788 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.16□□□□□ -0.3
DffbO54788 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
DffbO54788 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.16□□□□□ -0.3
DffbO54788 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.16□□□□□ -0.3
DffbO54788 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
DffbO54788 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
DffbO54788 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.16□□□□□ -0.3
DffbO54788 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.16□□□□□ -0.3
DffbO54788 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
DffbO54788 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
DffbO54788 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.15□□□□□ -0.3
DffbO54788 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
DffbO54788 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.15□□□□□ -0.3
DffbO54788 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
DffbO54788 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
DffbO54788 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.15□□□□□ -0.3
DffbO54788 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
DffbO54788 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DffbO54788 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DffbO54788 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
DffbO54788 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DffbO54788 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DffbO54788 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DffbO54788 Gm11950-201ENSMUST00000121615 838 ntBASIC13.15□□□□□ -0.3
DffbO54788 Gm25406-201ENSMUST00000157599 105 ntBASIC13.15□□□□□ -0.3
DffbO54788 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.15□□□□□ -0.3
DffbO54788 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
DffbO54788 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
DffbO54788 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms