Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lsm2O35900 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lsm2O35900 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Gm13559-201ENSMUST00000120476 863 ntBASIC13.64□□□□□ -0.23
Lsm2O35900 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Lsm2O35900 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.64□□□□□ -0.23
Lsm2O35900 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.64□□□□□ -0.23
Lsm2O35900 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lsm2O35900 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.64□□□□□ -0.23
Lsm2O35900 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.64□□□□□ -0.23
Lsm2O35900 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.64□□□□□ -0.23
Lsm2O35900 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lsm2O35900 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Lsm2O35900 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Lsm2O35900 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Gm12008-201ENSMUST00000117791 755 ntBASIC13.63□□□□□ -0.23
Lsm2O35900 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.63□□□□□ -0.23
Lsm2O35900 Gm45058-201ENSMUST00000205810 766 ntBASIC13.63□□□□□ -0.23
Lsm2O35900 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.63□□□□□ -0.23
Lsm2O35900 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.63□□□□□ -0.23
Lsm2O35900 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Lsm2O35900 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.63□□□□□ -0.23
Lsm2O35900 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lsm2O35900 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lsm2O35900 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm2O35900 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lsm2O35900 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm2O35900 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Lsm2O35900 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.62□□□□□ -0.23
Lsm2O35900 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm2O35900 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm2O35900 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.62□□□□□ -0.23
Lsm2O35900 Gm8520-201ENSMUST00000186517 868 ntBASIC13.62□□□□□ -0.23
Lsm2O35900 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.62□□□□□ -0.23
Lsm2O35900 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.62□□□□□ -0.23
Lsm2O35900 Gm21559-201ENSMUST00000220638 855 ntBASIC13.62□□□□□ -0.23
Lsm2O35900 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.62□□□□□ -0.23
Lsm2O35900 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.62□□□□□ -0.23
Lsm2O35900 Gm8587-201ENSMUST00000076538 843 ntBASIC13.62□□□□□ -0.23
Lsm2O35900 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Lsm2O35900 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lsm2O35900 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lsm2O35900 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm2O35900 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms