Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Capn1O35350 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Capn1O35350 Gm2213-201ENSMUST00000197485 688 ntBASIC14.2□□□□□ -0.14
Capn1O35350 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.2□□□□□ -0.14
Capn1O35350 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.2□□□□□ -0.14
Capn1O35350 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Capn1O35350 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Capn1O35350 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Capn1O35350 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.19□□□□□ -0.14
Capn1O35350 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Capn1O35350 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.19□□□□□ -0.14
Capn1O35350 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Gm4995-201ENSMUST00000117247 432 ntBASIC14.19□□□□□ -0.14
Capn1O35350 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.19□□□□□ -0.14
Capn1O35350 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.19□□□□□ -0.14
Capn1O35350 Gm5682-201ENSMUST00000173402 505 ntBASIC14.19□□□□□ -0.14
Capn1O35350 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.19□□□□□ -0.14
Capn1O35350 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.19□□□□□ -0.14
Capn1O35350 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.19□□□□□ -0.14
Capn1O35350 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.19□□□□□ -0.14
Capn1O35350 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Capn1O35350 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capn1O35350 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.18□□□□□ -0.14
Capn1O35350 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Capn1O35350 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Capn1O35350 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.18□□□□□ -0.14
Capn1O35350 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Capn1O35350 Gm11764-201ENSMUST00000120221 623 ntBASIC14.18□□□□□ -0.14
Capn1O35350 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.18□□□□□ -0.14
Capn1O35350 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.18□□□□□ -0.14
Capn1O35350 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.18□□□□□ -0.14
Capn1O35350 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.18□□□□□ -0.14
Capn1O35350 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Capn1O35350 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Capn1O35350 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Capn1O35350 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capn1O35350 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Capn1O35350 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.17□□□□□ -0.14
Capn1O35350 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Capn1O35350 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms