Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.4□□□□□ -0.1
Cx3cl1O35188 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.4□□□□□ -0.1
Cx3cl1O35188 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Gm14722-201ENSMUST00000118943 689 ntBASIC14.4□□□□□ -0.1
Cx3cl1O35188 Gm11764-201ENSMUST00000120221 623 ntBASIC14.4□□□□□ -0.1
Cx3cl1O35188 Gm5682-201ENSMUST00000173402 505 ntBASIC14.4□□□□□ -0.1
Cx3cl1O35188 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cx3cl1O35188 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cx3cl1O35188 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.39□□□□□ -0.11
Cx3cl1O35188 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Grk6-207ENSMUST00000225925 2769 ntBASIC14.39□□□□□ -0.11
Cx3cl1O35188 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.39□□□□□ -0.11
Cx3cl1O35188 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.39□□□□□ -0.11
Cx3cl1O35188 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.39□□□□□ -0.11
Cx3cl1O35188 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.39□□□□□ -0.11
Cx3cl1O35188 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.39□□□□□ -0.11
Cx3cl1O35188 Gm44771-201ENSMUST00000206975 626 ntBASIC14.39□□□□□ -0.11
Cx3cl1O35188 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.39□□□□□ -0.11
Cx3cl1O35188 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.39□□□□□ -0.11
Cx3cl1O35188 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Gm15590-201ENSMUST00000078419 552 ntBASIC14.39□□□□□ -0.11
Cx3cl1O35188 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cx3cl1O35188 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.38□□□□□ -0.11
Cx3cl1O35188 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Gm37153-201ENSMUST00000193637 231 ntBASIC14.38□□□□□ -0.11
Cx3cl1O35188 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms