Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Alx4O35137 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Alx4O35137 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.67□□□□□ -0.22
Alx4O35137 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.67□□□□□ -0.22
Alx4O35137 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Alx4O35137 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Alx4O35137 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Gm15565-201ENSMUST00000118890 427 ntBASIC13.66□□□□□ -0.22
Alx4O35137 Gm15794-201ENSMUST00000120182 631 ntBASIC13.66□□□□□ -0.22
Alx4O35137 Rprl3-201ENSMUST00000157400 290 ntBASIC13.66□□□□□ -0.22
Alx4O35137 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Alx4O35137 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Alx4O35137 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.66□□□□□ -0.22
Alx4O35137 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Alx4O35137 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx4O35137 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Alx4O35137 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
Alx4O35137 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.65□□□□□ -0.22
Alx4O35137 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Alx4O35137 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Alx4O35137 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Gm11950-201ENSMUST00000121615 838 ntBASIC13.65□□□□□ -0.22
Alx4O35137 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.65□□□□□ -0.22
Alx4O35137 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.65□□□□□ -0.22
Alx4O35137 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Alx4O35137 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.65□□□□□ -0.22
Alx4O35137 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx4O35137 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Alx4O35137 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.65□□□□□ -0.22
Alx4O35137 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Alx4O35137 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Alx4O35137 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.64□□□□□ -0.23
Alx4O35137 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Alx4O35137 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Alx4O35137 Mir7071-201ENSMUST00000184847 69 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms