Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Gfra3O35118 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Gfra3O35118 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gfra3O35118 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gfra3O35118 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Gfra3O35118 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Gfra3O35118 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Gm14494-201ENSMUST00000118786 435 ntBASIC13.25□□□□□ -0.29
Gfra3O35118 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.25□□□□□ -0.29
Gfra3O35118 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.25□□□□□ -0.29
Gfra3O35118 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.25□□□□□ -0.29
Gfra3O35118 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.25□□□□□ -0.29
Gfra3O35118 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Gfra3O35118 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gfra3O35118 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Gfra3O35118 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Gfra3O35118 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Gfra3O35118 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.24□□□□□ -0.29
Gfra3O35118 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC13.24□□□□□ -0.29
Gfra3O35118 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Gfra3O35118 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Gfra3O35118 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.24□□□□□ -0.29
Gfra3O35118 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Gfra3O35118 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gfra3O35118 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.23□□□□□ -0.29
Gfra3O35118 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gfra3O35118 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Gfra3O35118 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gfra3O35118 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gfra3O35118 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Gfra3O35118 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Gfra3O35118 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Gm20614-201ENSMUST00000177106 632 ntBASIC13.23□□□□□ -0.29
Gfra3O35118 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.23□□□□□ -0.29
Gfra3O35118 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms