Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Usp35M0QWN7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Gm6736-201ENSMUST00000166583 948 ntBASIC16.44■□□□□ 0.22
Usp35M0QWN7 Gm2756-201ENSMUST00000195851 400 ntBASIC16.44■□□□□ 0.22
Usp35M0QWN7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.44■□□□□ 0.22
Usp35M0QWN7 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.44■□□□□ 0.22
Usp35M0QWN7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp35M0QWN7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.43■□□□□ 0.22
Usp35M0QWN7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp35M0QWN7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp35M0QWN7 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.42■□□□□ 0.22
Usp35M0QWN7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.42■□□□□ 0.22
Usp35M0QWN7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.42■□□□□ 0.22
Usp35M0QWN7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp35M0QWN7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp35M0QWN7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp35M0QWN7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms