Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim22J3QP37 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim22J3QP37 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smim22J3QP37 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smim22J3QP37 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smim22J3QP37 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.31■□□□□ 0.04
Smim22J3QP37 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim22J3QP37 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim22J3QP37 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim22J3QP37 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smim22J3QP37 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smim22J3QP37 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Smim22J3QP37 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Smim22J3QP37 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.3■□□□□ 0.04
Smim22J3QP37 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.3■□□□□ 0.04
Smim22J3QP37 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim22J3QP37 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.3■□□□□ 0.04
Smim22J3QP37 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.29■□□□□ 0.04
Smim22J3QP37 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.29■□□□□ 0.04
Smim22J3QP37 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smim22J3QP37 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.29■□□□□ 0.04
Smim22J3QP37 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Smim22J3QP37 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Gm14042-201ENSMUST00000120139 833 ntBASIC15.29■□□□□ 0.04
Smim22J3QP37 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.29■□□□□ 0.04
Smim22J3QP37 Gm18489-201ENSMUST00000172565 551 ntBASIC15.29■□□□□ 0.04
Smim22J3QP37 Gm27680-201ENSMUST00000184192 160 ntBASIC15.29■□□□□ 0.04
Smim22J3QP37 Gm4857-201ENSMUST00000192718 785 ntBASIC15.29■□□□□ 0.04
Smim22J3QP37 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.29■□□□□ 0.04
Smim22J3QP37 Gm37917-201ENSMUST00000194711 392 ntBASIC15.29■□□□□ 0.04
Smim22J3QP37 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.29■□□□□ 0.04
Smim22J3QP37 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.29■□□□□ 0.04
Smim22J3QP37 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.29■□□□□ 0.04
Smim22J3QP37 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.29■□□□□ 0.04
Smim22J3QP37 Nsd1-205ENSMUST00000224693 852 ntBASIC15.29■□□□□ 0.04
Smim22J3QP37 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim22J3QP37 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.28■□□□□ 0.04
Smim22J3QP37 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smim22J3QP37 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.28■□□□□ 0.04
Smim22J3QP37 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.28■□□□□ 0.04
Smim22J3QP37 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.28■□□□□ 0.04
Smim22J3QP37 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.28■□□□□ 0.04
Smim22J3QP37 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.28■□□□□ 0.04
Smim22J3QP37 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim22J3QP37 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms