Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa8J3QNX5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Mir770-201ENSMUST00000103252 94 ntBASIC13.98□□□□□ -0.17
Shisa8J3QNX5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Gm43799-201ENSMUST00000201845 579 ntBASIC13.98□□□□□ -0.17
Shisa8J3QNX5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.98□□□□□ -0.17
Shisa8J3QNX5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa8J3QNX5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Gm11355-201ENSMUST00000121120 306 ntBASIC13.97□□□□□ -0.17
Shisa8J3QNX5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms