Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC21.07■□□□□ 0.96
Tubgcp6G5E8P0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp6G5E8P0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Gm4875-201ENSMUST00000118257 786 ntBASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Gm24543-201ENSMUST00000103867 82 ntBASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Gm6539-201ENSMUST00000119157 1064 ntBASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp6G5E8P0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Gm9908-201ENSMUST00000211534 448 ntBASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Ldb3-207ENSMUST00000227819 1499 ntBASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp6G5E8P0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Gm7901-201ENSMUST00000120430 1597 ntBASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Gm12091-201ENSMUST00000146791 830 ntBASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Tubgcp6G5E8P0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Gm9719-201ENSMUST00000162765 543 ntBASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp6G5E8P0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tubgcp6G5E8P0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tubgcp6G5E8P0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Tubgcp6G5E8P0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tubgcp6G5E8P0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms