Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
NpcdF8VQB8 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.38■□□□□ 0.53
NpcdF8VQB8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NpcdF8VQB8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NpcdF8VQB8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.38■□□□□ 0.53
NpcdF8VQB8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
NpcdF8VQB8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NpcdF8VQB8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NpcdF8VQB8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NpcdF8VQB8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.38■□□□□ 0.53
NpcdF8VQB8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.38■□□□□ 0.53
NpcdF8VQB8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.37■□□□□ 0.53
NpcdF8VQB8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.37■□□□□ 0.53
NpcdF8VQB8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.37■□□□□ 0.53
NpcdF8VQB8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.37■□□□□ 0.53
NpcdF8VQB8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NpcdF8VQB8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Gm44855-201ENSMUST00000205725 362 ntBASIC18.36■□□□□ 0.53
NpcdF8VQB8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NpcdF8VQB8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Syt7-204ENSMUST00000223586 1344 ntBASIC18.35■□□□□ 0.53
NpcdF8VQB8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Gm15653-201ENSMUST00000119247 907 ntBASIC18.35■□□□□ 0.53
NpcdF8VQB8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.35■□□□□ 0.53
NpcdF8VQB8 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.35■□□□□ 0.53
NpcdF8VQB8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NpcdF8VQB8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NpcdF8VQB8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.34■□□□□ 0.53
NpcdF8VQB8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms