Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Gm7506-201ENSMUST00000207758 815 ntBASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Gm18669-201ENSMUST00000216049 778 ntBASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh9F8VPK8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Pcdh9F8VPK8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdh9F8VPK8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Pcdh9F8VPK8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdh9F8VPK8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Efs-202ENSMUST00000227037 2540 ntBASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh9F8VPK8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Grk6-207ENSMUST00000225925 2769 ntBASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh9F8VPK8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Gm12895-201ENSMUST00000122214 226 ntBASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Gm8655-201ENSMUST00000221159 852 ntBASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh9F8VPK8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms