Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc188F6WEU2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc188F6WEU2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ccdc188F6WEU2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc188F6WEU2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc188F6WEU2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc188F6WEU2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Gm12176-201ENSMUST00000121420 875 ntBASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc188F6WEU2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Gm15236-201ENSMUST00000117309 379 ntBASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Gm14660-201ENSMUST00000119809 575 ntBASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Gm19220-201ENSMUST00000222682 803 ntBASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc188F6WEU2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Ccdc188F6WEU2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc188F6WEU2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc188F6WEU2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.33■□□□□ 0.05
Ccdc188F6WEU2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc188F6WEU2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc188F6WEU2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc188F6WEU2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Gm16570-201ENSMUST00000161951 436 ntBASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Gm24526-201ENSMUST00000082921 158 ntBASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms