Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
R3hdm1E9Q9Q2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
R3hdm1E9Q9Q2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
R3hdm1E9Q9Q2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
R3hdm1E9Q9Q2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
R3hdm1E9Q9Q2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
R3hdm1E9Q9Q2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Gm15358-201ENSMUST00000119249 520 ntBASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Gm18889-201ENSMUST00000174284 929 ntBASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Gm43125-201ENSMUST00000201724 730 ntBASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.87■□□□□ 0.29
R3hdm1E9Q9Q2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Rprl2-201ENSMUST00000157150 290 ntBASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Gm27622-201ENSMUST00000183779 60 ntBASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
R3hdm1E9Q9Q2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Mir449b-201ENSMUST00000104833 80 ntBASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms