Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Gm37935-201ENSMUST00000192012 982 ntBASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Asic1-205ENSMUST00000228185 1818 ntBASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.97■□□□□ 0.47
Pcdhb9E9Q5G2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 BC037039-201ENSMUST00000192003 2205 ntBASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Celf4-206ENSMUST00000224553 1729 ntBASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Gm2272-201ENSMUST00000194903 582 ntBASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Thap2-203ENSMUST00000218989 527 ntBASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb9E9Q5G2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb9E9Q5G2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
Pcdhb9E9Q5G2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.96■□□□□ 0.46
Pcdhb9E9Q5G2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.96■□□□□ 0.46
Pcdhb9E9Q5G2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb9E9Q5G2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb9E9Q5G2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb9E9Q5G2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Gm16198-201ENSMUST00000118766 670 ntBASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb9E9Q5G2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms