Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Gm11628-201ENSMUST00000117568 171 ntBASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Gm6407-201ENSMUST00000176468 549 ntBASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Gm5523-201ENSMUST00000180415 997 ntBASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col6a3E9PWQ3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col6a3E9PWQ3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Gm5354-201ENSMUST00000182417 973 ntBASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Gm11814-201ENSMUST00000119515 929 ntBASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Gm8099-201ENSMUST00000200510 742 ntBASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col6a3E9PWQ3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col6a3E9PWQ3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col6a3E9PWQ3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col6a3E9PWQ3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a3E9PWQ3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Gm12997-201ENSMUST00000120207 640 ntBASIC15.08■□□□□ 0
Col6a3E9PWQ3 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.08■□□□□ 0
Col6a3E9PWQ3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a3E9PWQ3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a3E9PWQ3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.07■□□□□ 0
Col6a3E9PWQ3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a3E9PWQ3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms