Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Gm15653-201ENSMUST00000119247 907 ntBASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Gm7653-201ENSMUST00000214567 508 ntBASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Gm16476-201ENSMUST00000221544 139 ntBASIC19.52■□□□□ 0.72
Scn7aB1AYL1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn7aB1AYL1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC19.52■□□□□ 0.71
Scn7aB1AYL1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn7aB1AYL1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Scn7aB1AYL1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.52■□□□□ 0.71
Scn7aB1AYL1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Shd-206ENSMUST00000225145 998 ntBASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn7aB1AYL1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Gm6263-201ENSMUST00000120029 1342 ntBASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn7aB1AYL1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 AC124732.1-201ENSMUST00000221551 910 ntBASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Gm27631-201ENSMUST00000184163 466 ntBASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Gm29667-201ENSMUST00000190817 490 ntBASIC19.49■□□□□ 0.71
Scn7aB1AYL1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Scn7aB1AYL1 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn7aB1AYL1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn7aB1AYL1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms