Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm11127A7VMS2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gm11127A7VMS2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Gm18032-201ENSMUST00000222541 538 ntBASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm11127A7VMS2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Gm11127A7VMS2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Gm11127A7VMS2 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.59□□□□□ -0.23
Gm11127A7VMS2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm11127A7VMS2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Gm11127A7VMS2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm11127A7VMS2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm11127A7VMS2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms