Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Mir6404-201ENSMUST00000183699 94 ntBASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.57□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm6433-201ENSMUST00000118634 875 ntBASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Mir6982-201ENSMUST00000184354 68 ntBASIC10.55□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms