Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm6550-201ENSMUST00000187574 993 ntBASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm18622-201ENSMUST00000219361 595 ntBASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm11780-201ENSMUST00000136880 516 ntBASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 App-207ENSMUST00000227737 2827 ntBASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm1401-201ENSMUST00000122048 772 ntBASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 AV026068-213ENSMUST00000223675 1171 ntBASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms