Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm27389-201ENSMUST00000183622 195 ntBASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-5A0A075B6B9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm12008-201ENSMUST00000117791 755 ntBASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm13436-201ENSMUST00000120418 567 ntBASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm8520-201ENSMUST00000186517 868 ntBASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-5A0A075B6B9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms