Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Mir1199-201ENSMUST00000117015 119 ntBASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Gm14722-201ENSMUST00000118943 689 ntBASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-5A0A075B6B5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Gm12008-201ENSMUST00000117791 755 ntBASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Gm16061-201ENSMUST00000122167 857 ntBASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Gm8495-201ENSMUST00000188740 694 ntBASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms