Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav5-1A0A075B5Z7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm11594-201ENSMUST00000122313 162 ntBASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5-1A0A075B5Z7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm12008-201ENSMUST00000117791 755 ntBASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5-1A0A075B5Z7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm27301-201ENSMUST00000184012 127 ntBASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-1A0A075B5Z7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms