Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Gm17971-201ENSMUST00000190239 806 ntBASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Rps4l-201ENSMUST00000071745 943 ntBASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv4A0A075B5I2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Gm6376-201ENSMUST00000209407 580 ntBASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv4A0A075B5I2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Trbv4A0A075B5I2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv4A0A075B5I2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv4A0A075B5I2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trbv4A0A075B5I2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv4A0A075B5I2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Gm18489-201ENSMUST00000172565 551 ntBASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Gm5682-201ENSMUST00000173402 505 ntBASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Gm10499-201ENSMUST00000174094 934 ntBASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms