Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
PdfS4R2K0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
PdfS4R2K0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
PdfS4R2K0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
PdfS4R2K0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
PdfS4R2K0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
PdfS4R2K0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.8□□□□□ -0.52
PdfS4R2K0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.8□□□□□ -0.52
PdfS4R2K0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
PdfS4R2K0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
PdfS4R2K0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
PdfS4R2K0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.8□□□□□ -0.52
PdfS4R2K0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
PdfS4R2K0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdfS4R2K0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
PdfS4R2K0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
PdfS4R2K0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
PdfS4R2K0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
PdfS4R2K0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
PdfS4R2K0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.79□□□□□ -0.52
PdfS4R2K0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
PdfS4R2K0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.79□□□□□ -0.52
PdfS4R2K0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.79□□□□□ -0.52
PdfS4R2K0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
PdfS4R2K0 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.79□□□□□ -0.52
PdfS4R2K0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
PdfS4R2K0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
PdfS4R2K0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdfS4R2K0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
PdfS4R2K0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
PdfS4R2K0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.78□□□□□ -0.52
PdfS4R2K0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.78□□□□□ -0.52
PdfS4R2K0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.78□□□□□ -0.52
PdfS4R2K0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.78□□□□□ -0.52
PdfS4R2K0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.78□□□□□ -0.52
PdfS4R2K0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdfS4R2K0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms