Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Mir7071-201ENSMUST00000184847 69 ntBASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
H2afb3S4R1G7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
H2afb3S4R1G7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
H2afb3S4R1G7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
H2afb3S4R1G7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Mir3081-201ENSMUST00000175305 84 ntBASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb3S4R1G7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Gm13836-201ENSMUST00000121159 501 ntBASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Gm27742-201ENSMUST00000184667 60 ntBASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Gm7367-201ENSMUST00000057611 492 ntBASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb3S4R1G7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms