Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Auts2-212ENSMUST00000178555 309 ntBASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h3Q9Z0Y9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Nr1h3Q9Z0Y9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nr1h3Q9Z0Y9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.64■□□□□ 0.26
Nr1h3Q9Z0Y9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Prob1-201ENSMUST00000097619 3021 ntBASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h3Q9Z0Y9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Gm44872-201ENSMUST00000207864 420 ntBASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h3Q9Z0Y9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Gm15427-201ENSMUST00000117288 531 ntBASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Gm5177-201ENSMUST00000183092 997 ntBASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1h3Q9Z0Y9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nr1h3Q9Z0Y9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.61■□□□□ 0.25
Nr1h3Q9Z0Y9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nr1h3Q9Z0Y9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nr1h3Q9Z0Y9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nr1h3Q9Z0Y9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nr1h3Q9Z0Y9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nr1h3Q9Z0Y9 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms