Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Odf3b-204ENSMUST00000227834 930 ntBASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.61□□□□□ -0.39
Pfdn5Q9WU28 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Mir1199-201ENSMUST00000117015 119 ntBASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Gm12527-201ENSMUST00000117967 564 ntBASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Gm27463-201ENSMUST00000183569 57 ntBASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn5Q9WU28 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn5Q9WU28 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms