Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Gm5403-201ENSMUST00000117105 2795 ntBASIC13.49□□□□□ -0.25
Nubp1Q9R060 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Gm15358-201ENSMUST00000119249 520 ntBASIC13.49□□□□□ -0.25
Nubp1Q9R060 Rprl2-201ENSMUST00000157150 290 ntBASIC13.49□□□□□ -0.25
Nubp1Q9R060 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.49□□□□□ -0.25
Nubp1Q9R060 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Gm44335-201ENSMUST00000196879 141 ntBASIC13.49□□□□□ -0.25
Nubp1Q9R060 Gm44297-201ENSMUST00000198304 141 ntBASIC13.49□□□□□ -0.25
Nubp1Q9R060 Gm44346-201ENSMUST00000198851 141 ntBASIC13.49□□□□□ -0.25
Nubp1Q9R060 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 AC129323.1-201ENSMUST00000216733 470 ntBASIC13.49□□□□□ -0.25
Nubp1Q9R060 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nubp1Q9R060 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.48□□□□□ -0.25
Nubp1Q9R060 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Gm45657-201ENSMUST00000211318 1349 ntBASIC13.48□□□□□ -0.25
Nubp1Q9R060 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Nubp1Q9R060 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.48□□□□□ -0.25
Nubp1Q9R060 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Gm40332-201ENSMUST00000199847 938 ntBASIC13.48□□□□□ -0.25
Nubp1Q9R060 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.48□□□□□ -0.25
Nubp1Q9R060 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.48□□□□□ -0.25
Nubp1Q9R060 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.48□□□□□ -0.25
Nubp1Q9R060 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nubp1Q9R060 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.47□□□□□ -0.25
Nubp1Q9R060 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Mir6990-201ENSMUST00000183724 91 ntBASIC13.47□□□□□ -0.25
Nubp1Q9R060 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.47□□□□□ -0.25
Nubp1Q9R060 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.47□□□□□ -0.25
Nubp1Q9R060 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.47□□□□□ -0.25
Nubp1Q9R060 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms