Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Gm27525-201ENSMUST00000184465 107 ntBASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcf1Q9QZM3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Gm8344-201ENSMUST00000119813 856 ntBASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Gm15590-201ENSMUST00000078419 552 ntBASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Clcf1Q9QZM3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Clcf1Q9QZM3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms