Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Gm25026-201ENSMUST00000175017 188 ntBASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Mir3081-201ENSMUST00000175305 84 ntBASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Ank2-226ENSMUST00000189368 339 ntBASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Gm45574-201ENSMUST00000210921 331 ntBASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh5Q9QUM7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Gm13312-201ENSMUST00000119631 718 ntBASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Gm3344-201ENSMUST00000169610 603 ntBASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Gm17807-201ENSMUST00000186869 298 ntBASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Gm37629-201ENSMUST00000193635 1050 ntBASIC15.77■□□□□ 0.12
Msh5Q9QUM7 CT009711.2-202ENSMUST00000224538 973 ntBASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh5Q9QUM7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Msh5Q9QUM7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh5Q9QUM7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh5Q9QUM7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Msh5Q9QUM7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh5Q9QUM7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh5Q9QUM7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh5Q9QUM7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.76■□□□□ 0.11
Msh5Q9QUM7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms