Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trem1Q9JKE2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Gm43183-201ENSMUST00000200632 547 ntBASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trem1Q9JKE2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trem1Q9JKE2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trem1Q9JKE2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trem1Q9JKE2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trem1Q9JKE2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Gm37179-201ENSMUST00000194862 823 ntBASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Gm37025-201ENSMUST00000195159 829 ntBASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trem1Q9JKE2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms