Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm14722-201ENSMUST00000118943 689 ntBASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm18032-201ENSMUST00000222541 538 ntBASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13bQ9ET35 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13bQ9ET35 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms