Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Gm9385-201ENSMUST00000117563 472 ntBASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3bQ9ES34 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Celf4-206ENSMUST00000224553 1729 ntBASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Gm45612-201ENSMUST00000211320 160 ntBASIC18.16■□□□□ 0.5
Ube3bQ9ES34 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.16■□□□□ 0.5
Ube3bQ9ES34 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.16■□□□□ 0.5
Ube3bQ9ES34 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Rpph1-201ENSMUST00000175096 319 ntBASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Gm20553-201ENSMUST00000204205 844 ntBASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.15■□□□□ 0.5
Ube3bQ9ES34 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.14■□□□□ 0.5
Ube3bQ9ES34 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.14■□□□□ 0.49
Ube3bQ9ES34 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3bQ9ES34 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3bQ9ES34 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3bQ9ES34 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3bQ9ES34 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3bQ9ES34 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.14■□□□□ 0.49
Ube3bQ9ES34 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3bQ9ES34 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.14■□□□□ 0.49
Ube3bQ9ES34 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms