Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm28631-201ENSMUST00000190740 334 ntBASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Gm15321-201ENSMUST00000121290 288 ntBASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Gm27533-201ENSMUST00000183800 152 ntBASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nkx2-4Q9EQM3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Gm11478-201ENSMUST00000117851 599 ntBASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Gm45384-201ENSMUST00000210451 277 ntBASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-4Q9EQM3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Gm27920-201ENSMUST00000183953 96 ntBASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nkx2-4Q9EQM3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Gm14722-201ENSMUST00000118943 689 ntBASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Gm12138-201ENSMUST00000122180 951 ntBASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms