Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Mtag2-201ENSMUST00000058665 714 ntBASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Mbd3l1Q9D9H3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.27□□□□□ -0.28
Mbd3l1Q9D9H3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mbd3l1Q9D9H3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mbd3l1Q9D9H3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mbd3l1Q9D9H3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.27□□□□□ -0.28
Mbd3l1Q9D9H3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mbd3l1Q9D9H3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Mbd3l1Q9D9H3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Mbd3l1Q9D9H3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mbd3l1Q9D9H3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mbd3l1Q9D9H3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mbd3l1Q9D9H3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms