Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4bQ9D8B3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Gm6089-201ENSMUST00000197666 938 ntBASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4bQ9D8B3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 BC037039-201ENSMUST00000192003 2205 ntBASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Gm13418-201ENSMUST00000119097 944 ntBASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4bQ9D8B3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm44357-201ENSMUST00000195897 142 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm19658-201ENSMUST00000196231 138 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm44367-201ENSMUST00000196836 138 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm44350-201ENSMUST00000197197 138 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm44390-201ENSMUST00000197533 144 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm44313-201ENSMUST00000198018 138 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm44486-201ENSMUST00000198508 138 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm44314-201ENSMUST00000199263 138 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm44394-201ENSMUST00000199558 138 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm44484-201ENSMUST00000199873 138 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm44466-201ENSMUST00000200264 138 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm44359-201ENSMUST00000200671 138 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Chmp4bQ9D8B3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Gm25990-201ENSMUST00000102440 86 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms