Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4cQ9D7F7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Chmp4cQ9D7F7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4cQ9D7F7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Chmp4cQ9D7F7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4cQ9D7F7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4cQ9D7F7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Chmp4cQ9D7F7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4cQ9D7F7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Gm25745-201ENSMUST00000174945 133 ntBASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Gm44454-201ENSMUST00000198541 138 ntBASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4cQ9D7F7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4cQ9D7F7 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm8825-201ENSMUST00000182565 998 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm4518-201ENSMUST00000182638 718 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC18.36■□□□□ 0.53
Chmp4cQ9D7F7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms