Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf225Q9D7D1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf225Q9D7D1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf225Q9D7D1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf225Q9D7D1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf225Q9D7D1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf225Q9D7D1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf225Q9D7D1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Gm16112-201ENSMUST00000159075 382 ntBASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Gm272-201ENSMUST00000222073 919 ntBASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Olfr1153-201ENSMUST00000052300 957 ntBASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf225Q9D7D1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 AC139754.2-201ENSMUST00000218037 1455 ntBASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Mir669o-201ENSMUST00000103898 96 ntBASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Gm24589-201ENSMUST00000116692 94 ntBASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Gm17971-201ENSMUST00000190239 806 ntBASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Gm43347-201ENSMUST00000200226 580 ntBASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf225Q9D7D1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Gm8318-201ENSMUST00000182954 872 ntBASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Gm7238-201ENSMUST00000206467 973 ntBASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Rnf225Q9D7D1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms