Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.3■□□□□ 0.2
Gm3404Q9D506 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.3■□□□□ 0.2
Gm3404Q9D506 Gm5682-201ENSMUST00000173402 505 ntBASIC16.3■□□□□ 0.2
Gm3404Q9D506 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 AV026068-213ENSMUST00000223675 1171 ntBASIC16.3■□□□□ 0.2
Gm3404Q9D506 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.3■□□□□ 0.2
Gm3404Q9D506 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3404Q9D506 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm3404Q9D506 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm3404Q9D506 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.29■□□□□ 0.2
Gm3404Q9D506 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3404Q9D506 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Mir5126-201ENSMUST00000175513 77 ntBASIC16.28■□□□□ 0.2
Gm3404Q9D506 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Gm37153-201ENSMUST00000193637 231 ntBASIC16.28■□□□□ 0.2
Gm3404Q9D506 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.28■□□□□ 0.2
Gm3404Q9D506 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm3404Q9D506 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3404Q9D506 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3404Q9D506 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3404Q9D506 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3404Q9D506 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3404Q9D506 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3404Q9D506 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms