Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.07■□□□□ 0.48
Smc3Q9CW03 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Gm25745-201ENSMUST00000174945 133 ntBASIC18.07■□□□□ 0.48
Smc3Q9CW03 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Gm15165-201ENSMUST00000118140 502 ntBASIC18.06■□□□□ 0.48
Smc3Q9CW03 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Gm19164-201ENSMUST00000210667 640 ntBASIC18.06■□□□□ 0.48
Smc3Q9CW03 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.06■□□□□ 0.48
Smc3Q9CW03 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smc3Q9CW03 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Gm14722-201ENSMUST00000118943 689 ntBASIC18.05■□□□□ 0.48
Smc3Q9CW03 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Grk6-207ENSMUST00000225925 2769 ntBASIC18.05■□□□□ 0.48
Smc3Q9CW03 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc3Q9CW03 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.04■□□□□ 0.48
Smc3Q9CW03 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.04■□□□□ 0.48
Smc3Q9CW03 Gm13836-201ENSMUST00000121159 501 ntBASIC18.04■□□□□ 0.48
Smc3Q9CW03 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.04■□□□□ 0.48
Smc3Q9CW03 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc3Q9CW03 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms