Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Gm27838-201ENSMUST00000184829 128 ntBASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Gm43433-201ENSMUST00000196573 481 ntBASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldnd1Q9CQX5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Gm18766-201ENSMUST00000189811 808 ntBASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldnd1Q9CQX5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Gm14928-201ENSMUST00000120198 477 ntBASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Gm27920-201ENSMUST00000183953 96 ntBASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Gm44344-201ENSMUST00000200287 129 ntBASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldnd1Q9CQX5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cldnd1Q9CQX5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cldnd1Q9CQX5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cldnd1Q9CQX5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cldnd1Q9CQX5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cldnd1Q9CQX5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms