Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RTRAFQ9CQE8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RTRAFQ9CQE8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RTRAFQ9CQE8 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RTRAFQ9CQE8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
RTRAFQ9CQE8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
RTRAFQ9CQE8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RTRAFQ9CQE8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.52□□□□□ -0.4
RTRAFQ9CQE8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
RTRAFQ9CQE8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RTRAFQ9CQE8 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTRAFQ9CQE8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Gm15378-201ENSMUST00000121894 207 ntBASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Gm8495-201ENSMUST00000188740 694 ntBASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTRAFQ9CQE8 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Gm12134-201ENSMUST00000122109 520 ntBASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms