Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Gm15565-201ENSMUST00000118890 427 ntBASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Gm7367-201ENSMUST00000057611 492 ntBASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.87□□□□□ -0.19
Krt88Q9CPR6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Krt88Q9CPR6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.86□□□□□ -0.19
Krt88Q9CPR6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Krt88Q9CPR6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Mir5130-201ENSMUST00000175160 84 ntBASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Gm37722-201ENSMUST00000193757 208 ntBASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms