Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Gm12008-201ENSMUST00000117791 755 ntBASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf8Q99PV0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Mir7023-201ENSMUST00000185093 64 ntBASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Mir6977-201ENSMUST00000184960 64 ntBASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf8Q99PV0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Gm43767-201ENSMUST00000198933 381 ntBASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.56□□□□□ -0.4
Prpf8Q99PV0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Haglr-201ENSMUST00000100000 2085 ntBASIC12.56□□□□□ -0.4
Prpf8Q99PV0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms